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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11607512 chr11:77700152 A/G INTS4L1 chr7:64601603-64694600:+ 0.47 6.61 1.3E-10 Box Plot
BLCA rs11607903 chr11:63932140 G/A SBSN chr19:36014269-36019253:- -0.48 -6.03 3.79E-9 Box Plot
BLCA rs11620695 chr14:39766753 T/C LOC647288 chr13:75811890-75814517:- -0.39 -6.3 8.21E-10 Box Plot
BLCA rs11621264 chr14:39728208 A/G LOC647288 chr13:75811890-75814517:- -0.39 -6.22 1.28E-9 Box Plot
BLCA rs11621330 chr14:39741978 G/T LOC647288 chr13:75811890-75814517:- -0.41 -7.02 9.93E-12 Box Plot
BLCA rs11624144 chr14:39781516 C/T LOC647288 chr13:75811890-75814517:- -0.4 -6.43 3.77E-10 Box Plot
BLCA rs11624150 chr14:39747988 A/G LOC647288 chr13:75811890-75814517:- -0.39 -6.33 7.01E-10 Box Plot
BLCA rs11624839 chr14:39766612 A/G LOC647288 chr13:75811890-75814517:- -0.4 -6.37 5.4E-10 Box Plot
BLCA rs11626679 chr14:39776919 T/G LOC647288 chr13:75811890-75814517:- -0.4 -6.35 5.98E-10 Box Plot
BLCA rs11627580 chr14:39722836 T/C LOC647288 chr13:75811890-75814517:- -0.39 -6.19 1.51E-9 Box Plot
BLCA rs11630720 chr15:63984772 A/G VCX chrX:7810303-7812184:+ 0.34 6.03 3.87E-9 Box Plot
BLCA rs11631436 chr15:64039879 G/A VCX chrX:7810303-7812184:+ 0.36 6.28 9.44E-10 Box Plot
BLCA rs11632919 chr15:64078438 C/T VCX chrX:7810303-7812184:+ 0.36 6.26 1.01E-9 Box Plot
BLCA rs11633830 chr15:64054149 C/T VCX chrX:7810303-7812184:+ 0.35 6.07 3.16E-9 Box Plot
BLCA rs11634705 chr15:64059892 C/T VCX chrX:7810303-7812184:+ 0.35 6.07 3.16E-9 Box Plot